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Zebrafish contract research and commercial licenses

For contract research using Morpholinos in zebrafish or to license Morpholinos for commercial use in zebrafish in the USA, contact Zygogen, Inc. See the Outside Resources box for more information.

Publications Database

You can browse the 2292 publications in our database by using the table and links below. To view details of a record simply click the row link. You can sort the table by clicking the column headers.
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Publications - Page 1
AuthorsCitationAbstractTitleDelivery MethodOrganism
Ahn DG, Kourakis MJ, Rohde LA, Silver LM, Ho RKNature 2002 Jun 13;417(6890):754-8The T-box genes Tbx4 and Tbx5 have been shown to have key functions in the specification of the i...T-box gene tbx5 is essential for formation of the pectoral limb bud.Microinjectionzebrafish
Akagi K, Kyun Park E, Mood K, Daar IODev Dyn. 2002 Mar;223(2):216-28.The docking protein SNT1/FRS2 (fibroblast growth factor receptor substrate 2) is implicated in th...Docking protein SNT1 is a critical mediator of fibroblast growth factor signaling during Xenopus ...MicroinjectionXenopus
Amatruda J.F., Shepard J.L., Stern H.M., Zon L.ICancer Cell 2002. 1(3): 229-231.The zebrafish, with its combination of forward genetics and vertebrate biology, has great potenti...Zebrafish as a cancer model system.Microinjectionzebrafish
Amacher SL, Draper BW, Summers BR, Kimmel CBDevelopment 2002 129(14):3311-3323T-box genes encode transcriptional regulators that control many aspects of embryonic development....The zebrafish T-box genes no tail and spadetail are required for development of trunk and tail me...Microinjectionzebrafish
Andermann P, Ungos J, Raible DWDev Biol. 2002 Nov 1;251(1):45-58Cells delaminate from epithelial placodes to form sensory ganglia in the vertebrate head. We desc...Neurogenin1 Defines Zebrafish Cranial Sensory Ganglia PrecursorsMicroinjectionzebrafish
Angerer LM, Oleksyn DW, Levine AM, Li X, Klein WH, Angerer RCDevelopment. 2001 Nov;128(22):4393-404We have identified a single homolog of goosecoid, SpGsc, that regulates cell fates along both the...Sea urchin goosecoid function links fate specification along the animal-vegetal and oral-aboral e...Microinjectionsea urchin
Arora V, Hannah TL, Iversen PL, Brand RMPharm Res. 2002 Oct;19(10):1465-70PURPOSE: To determine if dermal absorption of an antisense phosphorodiamidate Morpholino oligomer...Transdermal use of phosphorodiamidate morpholino oligomer AVI-4472 inhibits cytochrome P450 3A2 a...transdermalSprague Dawley rats & hairless CRL:SK1 mice
Arora V, Cate ML, Ghosh C, Iversen PLDrug Metab Dispos. 2002 Jul 1;30(7):757-762Antisense phosphorodiamidate morpholino oligomers (PMO) inhibit targeted gene expression by preve...Phosphorodiamidate Morpholino Antisense Oligomers Inhibit Expression of Human Cytochrome P450 3A4...Special Deliverycell culture: hepatocytes (human primary cells), Caco-2/h3A4 cells
Arora V, Knapp DC, Reddy MT, Weller DD, Iversen PL.J Pharm Sci. 2002 Apr;91(4):1009-18Antisense phosphorodiamidate Morpholino oligomers (PMO) are resistant to degradation by cellular ...Bioavailability and efficacy of antisense morpholino oligomers targeted to c-myc and cytochrome P...in vivo: injectionrats, Sprague Dawley
Arora V, Iversen PLCurr Opin Mol Ther. 2001 Jun;3(3):249-57. Review.The cytochrome P450 (CYP) family is the most catalytically versatile component of the phase I oxi...Redirection of drug metabolism using antisense technologynot applicablenot applicable
Arora, V and Iversen, P.L.Drug Metab. And Disp. 2000. 28(2):131-138The rapidly proliferating cells of the regenerating liver after partial hepatectomy (PH) present ...Antisense oligonucleotides targeted to the p53 gene modulate rat liver regenerationin vivo: injectionrats, Sprague Dawley
Arora V, Knapp DC, Smith BL, Statdfield ML, Stein DA, Reddy MT, Weller DD, Iversen PLExp Ther 2000 Mar 292(3):921-8Expression of c-myc protein is associated with cell proliferation. The present study uses antisen...c-Myc antisense limits rat liver regeneration and indicates role for c-Myc in regulating cytochro...Injectionrats, Sprague Dawley
Agathon A, Thisse B, Thisse CGenesis. 2001 Jul;30(3):178-82No abstract available Morpholino knock-down of antivin1 and antivin2 upregulates nodal signalingMicroinjectionzebrafish
Araki I, Brand MGenesis. 2001 Jul;30(3):157-9No abstract availableMorpholino-induced knockdown of Fgf8 efficiently phenocopies the acerebellar (ACE) phenotypeMicroinjectionzebrafish
Audic Y, Boyle B, Slevin M, Hartley RSGenesis. 2001 Jul;30(3):107-9No abstract available.Cyclin E morpholino delays embryogenesis in XenopusMicroinjectionXenopus
Bai RY, Koester C, Ouyang T, Hahn SA, Hammerschmidt M, Peschel C, Duyster JNat Cell Biol 2002 Mar;4 (3):181-90Proteins of the transforming growth factor beta(TGFbeta) superfamily regulate diverse cellular re...SMIF, a Smad4-interacting protein that functions as a co-activator in TGF [beta] signallingMicroinjectionzebrafish
Basye J, Trent JO, Gao D, Ebbinghaus SWNucleic Acids Res 2001 Dec 1;29(23):4873-80Triplex-forming oligonucleotides (TFOs) are good candidates to be used as site-specific DNA-bindi...Triplex formation by morpholino oligodeoxyribonucleotides in the HER-2/neu promoter requires the ...not applicablenot applicable
Bauer H, Lele Z, Rauch GJ, Geisler R, Hammerschmidt MDevelopment 2001 128(6):849-858Ventral specification of mesoderm and ectoderm depends on signaling by members of the bone morpho...The type I serine/threonine kinase receptor Alk8/Lost-a-fin is required for Bmp2b/7 signal transd...Microinjectionzebrafish
Behra M, Cousin X, Bertrand C, Vonesch JL, Biellmann D, Chatonnet A, Strahle UNat Neurosci. 2002 Feb;5(2):111-8The neurotransmitter acetylcholine (ACh) has a crucial role in central and neuromuscular synapses...Acetylcholinesterase is required for neuronal and muscular development in the zebrafish embryoMicroinjectionzebrafish
Bingham S, Nasevicius A, Ekker SC, Chandrasekhar AGenesis 2001 Jul;30(3):170-4No abstract available.Sonic hedgehog and tiggy-winkle hedgehog cooperatively induce zebrafish branchiomotor neuronsMicroinjectionzebrafish
Boonanuntanasarn S, Yoshizaki G, Takeuchi Y, Morita T, and Takeuchi TMarine Biotechnology 2002. 4:256-266Gene knock-down technology using antisense molecules has many applications for studying gene func...Gene Knock-down in Rainbow Trout Embryos Using Antisense Morpholino Phosphorodiamidate Oligonucle...Microinjectionrainbow trout
Bota DA, Davies KJNat Cell Biol 2002 Sep;4(9):674-680Mitochondrial aconitase is sensitive to oxidative inactivation and can aggregate and accumulate i...Lon protease preferentially degrades oxidized mitochondrial aconitase by an ATP-stimulated mechan...Special Deliverycell culture: human fibroblasts WI-38 VA-13
Braat AK, van De Water S, Korving J, Zivkovic D.Genesis. 2001 Jul;30(3):183-5No abstract available.A zebrafish vasa morphant abolishes Vasa protein but does not affect the establishment of the ger...Microinjectionzebrafish
Brand, R.M. and Iversen, P.L.Advances Drug Devel. Reviews. 2000. 44(1): 51-57The potential for using antisense compounds as therapeutic agents has generated great enthusiasm....Transdermal delivery of antisense compoundstransdermalnot applicable
Branford WW, Yost HJCurr Biol. 2002 Dec 23;12(24):2136-41During gastrulation, diffusible "organizer" signals, including members of the TGFbeta Nodal subfa...Lefty-dependent inhibition of nodal- and wnt-responsive organizer gene expression is essential fo...MicroinjectionXenopus
Braun S, Hanselmann C, Gassmann MG, auf dem Keller U, Born-Berclaz C, Chan K, Kan YW, Werner SMol Cell Biol. 2002 Aug;22(15):5492-505Keratinocyte growth factor (KGF) is a potent mitogen for epithelial cells, and it promotes surviv...Nrf2 transcription factor, a novel target of keratinocyte growth factor action which regulates ge...Special Deliverycell culture: mouse primary keratinocytes
Brent L, Drapeau PNeuroscience 2002 Oct 1;114(2):275We have examined whether antisense morpholino oligonucleotides (morpholinos) can be used as a too...Targeted 'knockdown' of channel expression in vivo with an antisense morpholino oligonucleotideMicroinjectionzebrafish
Burgess S, Reim G, Chen W, Hopkins N, Brand MDevelopment. 2002 Feb; 129(4):905-916n early embryonic development, the brain is divided into three main regions along the anteroposte...The zebrafish spiel-ohne-grenzen (spg) gene encodes the POU domain protein Pou2 related to mammal...Microinjectionzebrafish
Carl M, Loosli F, Wittbrodt JDevelopment. 2002 Sep;129(17):4057-63The establishment of retinal identity and the subsequent patterning of the optic vesicle are the ...Six3 inactivation reveals its essential role for the formation and patterning of the vertebrate e...Microinjectionmedaka embryos
Chakhmakhcheva, O., Andrianov, M., Buryakova, A., Choob, M., & Efimov, VNucleosides Nucleotides 1999 18:1427-1428The solid phase synthesis of the three types of morpholino analogues of nucleic acids has been ac...Synthesis and properties of some morpholino oligonucleotide analogues
Chan J, Bayliss P.E., Wood J.M., Roberts T.M.Cancer Cell. 2002. 1(3):257-267Striking homology between signaling molecules in zebrafish and humans suggests that compounds kno...Dissection of angiogenic signaling in zebrafish using a chemical genetic approachMicroinjectionzebrafish
Chen YH, Tsai HJDifferentiation. 2002 Oct;70(8):447-56Myf-5 is a stage-dependent transcription factor associated with somitogenesis. To study its biolo...Treatment with Myf5-morpholino results in somite patterning and brain formation defects in zebraf...Microinjectionzebrafish
Childs S, Chen JN, Garrity DM, Fishman MCDevelopment. 2002 Feb;129(4):973-8 Little is known about how vascular patterns are generated in the embryo. The vasculature of the ...Patterning of angiogenesis in the zebrafish embryoMicroinjectionzebrafish
Ciruna B, Weidinger G, Knaut H, Thisse B, Thisse C, Raz E, Schier AFProc Natl Acad Sci U S A. 2002 Nov 12;99(23):14919-24. Epub 2002 Oct 23.We report a generally applicable strategy for transferring zygotic lethal mutations through the z...Production of maternal-zygotic mutant zebrafish by germ-line replacementMicroinjectionzebrafish
Collavin L, Kirschner MWDevelopment. 2003 Feb;130(4):805-16The prevailing model of dorsal ventral patterning of the amphibian embryo predicts that the prosp...The secreted Frizzled-related protein Sizzled functions as a negative feedback regulator of extre...MicroinjectionXenopus
Coonrod SA, Bolling LC, Wright PW, Visconti PE, Herr JCGenesis. 2001 Jul;30(3):198-200No abstract available.A morpholino phenocopy of the mouse MOS mutationMicroinjectionmouse oocytes
Corey DR, Abrams JMGenome Biology 2001 2(5): reviews1015.1-1015.3Antisense oligonucleotides provide a promising approach to investigating gene function in vivo, b...Morpholino antisense oligonucleotides: tools for investigating vertebrate developmentnot applicablenot applicable
Cornell RA, Eisen JSDevelopment. 2002 Jun;129(11):2639-48In zebrafish, cells at the lateral edge of the neural plate become Rohon-Beard primary sensory ne...Delta/Notch signaling promotes formation of zebrafish neural crest by repressing Neurogenin 1 fun...Microinjectionzebrafish
Crosier PS, Kalev-Zylinska ML, Hall CJ, Flores MV, Horsfield JA, Crosier KEInt J Dev Biol. 2002;46(4):493-502Studies in zebrafish have potential to contribute to understanding of the vertebrate hematopoieti...Pathways in blood and vessel development revealed through zebrafish geneticsnot applicablezebrafish
Cui Z, Clark KJ, Kaufman CD, Hackett PBGenesis. 2001 Jul;30(3):149-53No abstract available.Inhibition of skiA and skiB gene expression ventralizes zebrafish embryosMicroinjectionzebrafish
Dagle JM, Weeks DLDifferentiation. 2001 Dec;69(2-3):75-82.Research on embryonic development and differentiation provides a sensitive, but challenging oppor...Oligonucleotide-based strategies to reduce gene expressionnot applicablenot applicable
Dahmane N, Sanchez P, Gitton Y, Palma V, Sun T, Beyna M, Weiner H and Altaba ARDevelopment 2001 128:5201-5212The mechanisms that regulate the growth of the brain remain unclear. We show that Sonic hedgehog ...The Sonic Hedgehog-Gli pathway regulates dorsal brain growth and tumorigenesisMicroinjectionXenopus
Darken RS, Scola AM, Rakeman AS, Das G, Mlodzik M, Wilson PAEMBO J. 2002 Mar; 21(5):976-985The signaling mechanisms that specify, guide and coordinate cell behavior during embryonic morpho...The planar polarity gene strabismus regulates convergent extension movements in XenopusMicroinjectionXenopus
Davidson G, Mao B, Del Barco Barrantes I, Niehrs CDevelopment. 2002 Dec;129(24):5587-96A gradient of Wnt/beta-catenin signalling formed by posteriorising Wnts and anteriorising Wnt ant...Kremen proteins interact with Dickkopf1 to regulate anteroposterior CNS patterningMicroinjectionXenopus
Davidson EH, Rast JP, Oliveri P, Ransick A, Calestani C, Yuh CH, Minokawa T, Amore G, Hinman V, A...Dev Biol. 2002 Jun 1;246(1):162-90We present the current form of a provisional DNA sequence-based regulatory gene network that expl...A provisional regulatory gene network for specification of endomesoderm in the sea urchin embryoMicroinjectionSea urchins
Deardorff MA, Tan C, Saint-Jeannet JP, Klein PSDevelopment 2001 Oct 1;128(19):3655-3663Wnts are a large family of secreted molecules implicated in numerous developmental processes. Fri...A role for frizzled 3 in neural crest development.MicroinjectionXenopus
Deng J, Hua K, Lesser SS, Harp JBEndocrinology 2000 Jul;141(7):2370-6Signal transducer and activator of transcription-3 (STAT3) is abundantly expressed in preadipocyt...Activation of signal transducer and activator of transcription-3 during proliferative phases of 3...Scrape Deliverycell culture: 3T3-L1 preadipocytes
Devi GRCurr Opin Mol Ther. 2002 Apr;4(2):138-48. Review.Prostate cancer, like most other solid tumors, represents a heterogeneous entity consisting of a ... Prostate cancer: status of current treatments and emerging antisense-based therapies
Devi GR, Oldenkamp JR, London CA, Iversen PLProstate. 2002 Nov 1;53(3):200-10BACKGROUND: Amplification of the proto-oncogene c-myc has been identified as one of the most comm...Inhibition of human chorionic gonadotropin beta-subunit modulates the mitogenic effect of c-myc i...culture: scrape loading and syringe loading; mouse: IP injectioncultures & mice: human DU145, PC-3, LNCaP prostate cancer lines, male athymic (Ncr nu/nu) mice
Dibner C, Elias S, Frank DDevelopment. 2001 Sep;128(18):3415-26Meis-family homeobox proteins have been shown to regulate cell fate specification in vertebrate a... XMeis3 protein activity is required for proper hindbrain patterning in Xenopus laevis embryosMicroinjectionXenopus

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